Database currently included in biobar

biobar 1.2 provides browsing and searching access to the following biological databases.


Data Collections
  1. EBI Databases with SRS
  2. NCBI Databases including PubMed
  3. DNA Data Bank of Japan (DDBJ)



Structural Databases
  1. Macromolecular Structure Database (MSD)
  2. Research Collaboratory for Structural Bioinformatics (RCSB)
  3. Protein Data Bank, Japan (PDBj)
  4. Nucleic Acid Database (NDB)
  5. Pfam
  6. CATH
  7. SCOP



Sequence Databases
  1. EMBL Nucleotide Database
  2. Ensembl Genome Browser
  3. UniProt Sequence Database
  4. InterPro
  5. Integr8
  6. Expert Protein Analysis System (ExPASy)
Functional Databases
  1. Gene Ontology (GO)
  2. IntAct
  3. Reactome Database
Plant Databases
  1. Gramene
  2. MaizeGDB
Animal Databases
  1. Saccharomyces Genome Database (SGD)
  2. Flybase
  3. Wormbase
  4. Rat Genome Database (RGD)
  5. Mouse Genome Informatics (MGI)