File:  [mozdev] / biobar / www / index.html
Revision 1.12: download - view: text, annotated - select for diffs - revision graph
Thu Jul 8 21:45:01 2004 UTC (14 years, 8 months ago) by jawahar
Branches: MAIN
CVS tags: HEAD
Cleaned up look of database list


<!-- ***************** INFO/NEWS *************** -->
  <div id="infoTabs">
    <div class="infoTab" id="whats-new">
      <h5 class="infoHeader">What's New</h5>
      <ul>
	<li>biobar- First Release July 2004</li>
      </ul>
    </div>
    
    <div class="infoTab" id="other-stuff">
      <h5 class="infoHeader">Other Stuff</h5>
      <ul>
	<li><a href="http://msdbar.mozdev.org">MSDbar</a></li>
	<li><a href="http://mozdev.org/">mozdev.org</a></li>
      </ul>
    </div>
    
    <!-- alternative image/table base tab works better in NS4 -->
    <!--
  <div class="infoTab" id="whats-new-image">
  <h5 class="infoHeader"><img src="http://www.mozdev.org/sharedimages/whatsnew_top.gif" width="154" alt="What's New"></h5>
  <div class="infoItems">
  <div>News item goes here</div>
  <div>More news item goes here</div>
  <div><a href="http://mozdev.org/">mozdev.org</a></div>
  </div>
  </div>
    -->
  </div>
  <!-- ***************** INFO/NEWS *************** -->
  
  <!-- MAIN CONTENT -->
  <h3> Biobar - A toolbar for browsing biological data and databases.</h3>
  <p>The <strong>biobar</strong> project is a bioinformatics power-browsing toolbar for Mozilla-based browsers 
    including Firefox and Netscape 7+. This toolbar provides access to all major biological data resources. 
    The primary advantage of this tool is that it allows a biologist to browse and retrieve data from Genomic, 
    Proteomic, Functional, Literature, Taxonomic and Structural databases. In addition to the browsing 
    features, <strong>biobar</strong>
    also provides links to important bioinformatics sites and services including services at the 
    <a href="http://www.ebi.ac.uk/">European Bioinformatics Institute (EBI)</a>,
    <a href="http://www.ncbi.nlm.nih.gov/">National Center for Biotechnology Information (NCBI)</a> and
    <a href="http://www.ddbj.nig.ac.jp/">DNA Data Bank of Japan (DDBJ)</a>. The tool also 
    provides links to major data deposition sites for nucleotide, protein and 3D-structure data. Finally, the 
    menu also contains links to many Sequence, Structure alignment and analysis tools.</p>
  
  <p> The first release of biobar provides browsing access to the following biological databases:

<table style="width: 60%; text-align: left;" border="1" cellpadding="2"
cellspacing="2">
<tbody>
<tr>
<td style="vertical-align: top;">Structure Databases<br>
</td>
<td style="vertical-align: top;">Macromolecular Structure
Database (MSD)<br>
Research Collaboratory for Structural Bioinformatics (RCSB)<br>
Protein Data Bank, Japan<br>
Pfam<br>
CATH<br>
SCOP<br>
</td>
</tr>
<tr>
<td style="vertical-align: top;">Sequence Databases<br>
</td>
<td style="vertical-align: top;">EMBL Nucleotide Database<br>
Ensembl Genome Browser<br>
UniProt Sequence Database<br>
InterPro<br>
Expert Protein Analysis System (ExPASy)<br>
<br>
</td>
</tr>
<tr>
<td style="vertical-align: top;">Functional Databases<br>
</td>
<td style="vertical-align: top;">Gene Ontology (GO)<br>
IntAct<br>
Reactome Database<br>
</td>
</tr>
<tr>
<td style="vertical-align: top;">Other Data Collections<br>
</td>
<td style="vertical-align: top;">NCBI Databases including PubMed,
OMIM, Genome, Protein, Nucleotide, MeSH etc<br>
DNA Data Bank of Japan (DDBJ)</td>
</tr>
</tbody>
</table>
</p>  
  <p><img src ="biobar.jpg" alt="biobar">
      
      <p> Biobar is an extension of the <a href="http://msdbar.mozdev.org/">MSDbar project</a> and complements 
	the functionality provided by <a href="http://expasybar.mozdev.org/">expasybar</a> and 
	<a href="http://pubmed.mozdev.org/">pubmedbar</a>. <b>Note:</b> Please unintall MSDbar before
	installing <strong>biobar</strong>. MSDbar may be uninstalled from the dropdown menu item (Uninstall)
	if <strong>jslib</strong> has been installed. You can install jslib 
	<a href="http://downloads.mozdev.org/jslib/xpi/jslib_current.xpi"><strong>here</strong></a>
      </p>
      
      <p> This project is under development and any comments/suggestions are welcome. 
	Please write to <script language="JavaScript">
	  document.write('<a hr'+'ef="mai'+'lto'+':'+'%6a%61%77%61%68%61%72%40%65%62%69%2e%61%63%2e%75%6b">&#106;&#97;&#119;&#97;&#104;&#97;&#114;&#64;&#101;&#98;&#105;&#46;&#97;&#99;&#46;&#117;&#107;<\/a>');
	</script></p>
      
      <?php require(NOTES2); ?>
      
      <script language="JavaScript" type="text/javascript"
	      src="http://m1.nedstatbasic.net/basic.js">
      </script>
      <script language="JavaScript" type="text/javascript">
	<!--
	nedstatbasic("ACOacA1b76rJ+Ei1yJIrRbvhVRDg", 0);
	// -->
      </script>
      <noscript> <a target="_blank"
		    href="http://v1.nedstatbasic.net/stats?ACOacA1b76rJ+Ei1yJIrRbvhVRDg"><img
		      src="http://m1.nedstatbasic.net/n?id=ACOacA1b76rJ+Ei1yJIrRbvhVRDg"
		      border="0" nosave width="18" height="18" alt="Nedstat Basic - Free web
		      site statistics"></a> </noscript>
      <!-- End Nedstat Basic code -->
      

FreeBSD-CVSweb <freebsd-cvsweb@FreeBSD.org>