File:  [mozdev] / biobar / www / index.html
Revision 1.8: download - view: text, annotated - select for diffs - revision graph
Wed Jul 7 13:21:48 2004 UTC (14 years, 10 months ago) by jawahar
Branches: MAIN
CVS tags: HEAD
Added Ensembl Genome Browser to the menu

    1: 
    2: <!-- ***************** INFO/NEWS *************** -->
    3: <div id="infoTabs">
    4:   <div class="infoTab" id="whats-new">
    5:     <h5 class="infoHeader">What's New</h5>
    6:     <ul>
    7:       <li>biobar- First Release July 2004</li>
    8:     </ul>
    9:   </div>
   10:   
   11:   <div class="infoTab" id="other-stuff">
   12:     <h5 class="infoHeader">Other Stuff</h5>
   13:     <ul>
   14:       <li><a href="http://msdbar.mozdev.org">MSDbar</a></li>
   15:       <li><a href="http://mozdev.org/">mozdev.org</a></li>
   16:     </ul>
   17:   </div>
   18:   
   19:   <!-- alternative image/table base tab works better in NS4 -->
   20:   <!--
   21:   <div class="infoTab" id="whats-new-image">
   22:   <h5 class="infoHeader"><img src="http://www.mozdev.org/sharedimages/whatsnew_top.gif" width="154" alt="What's New"></h5>
   23:   <div class="infoItems">
   24:   <div>News item goes here</div>
   25:   <div>More news item goes here</div>
   26:   <div><a href="http://mozdev.org/">mozdev.org</a></div>
   27: </div>
   28: </div>
   29:   -->
   30: </div>
   31: <!-- ***************** INFO/NEWS *************** -->
   32: 
   33: <!-- MAIN CONTENT -->
   34:     <h3> Biobar - A toolbar for browsing biological data and databases.</h3>
   35:     <p>The <strong>biobar</strong> project is a bioinformatics power-browsing toolbar for Mozilla-based browsers 
   36:       including Firefox and Netscape 7+. This toolbar provides access to all major biological data resources. 
   37:       The primary advantage of this tool is that it allows a biologist to browse and retrieve data from Genomic, 
   38:       Proteomic, Literature, Taxonomic and Structural databases. In addition to the browsing features, <strong>biobar</strong>
   39:       also provides links to important bioinformatics sites and services including services at the 
   40:       <a href="http://www.ebi.ac.uk/">European Bioinformatics Institute (EBI)</a> and 
   41:       <a href="http://www.ncbi.nlm.nih.gov/">National Center for Biotechnology Information (NCBI)</a>. The tool also 
   42:       provides links to major data deposition sites for nucleotide, protein and 3D-structure data. Finally, the 
   43:       menu also contains links to many Sequence, Structure alignment and analysis tools.</p>
   44:     
   45:     <p> The first release of biobar provides browsing access to the following biological databases:
   46:       <li>Macromolecular Structure Database (MSD)</li>
   47:       <li>Research Collaboratory for Structural Bioinformatics (RCSB)</li>
   48:       <li>Protein Data Bank, Japan</li>
   49:       <li>Pfam</li>
   50:       <li>CATH</li>
   51:       <li>SCOP</li>
   52:       <li>EMBL Nucleotide Database</li> 
   53:       <li>Ensembl Genome Browser</li>
   54:       <li>UniProt Sequence Database</li>
   55:       <li>InterPro</li>
   56:       <li>Gene Ontology (GO)</li>
   57:       <li>NEWT</li>
   58:       <li>Expert Protein Analysis System (ExPASy)</li>
   59:       <li>NCBI Databases including PubMed, OMIM, Genome, Protein, Nucleotide, MeSH etc</li>
   60:     </p>
   61:     
   62:     <p> Biobar is an extension of the <a href="http://msdbar.mozdev.org/">MSDbar project</a> and complements 
   63:       the functionality provided by <a href="http://expasybar.mozdev.org/">expasybar</a> and 
   64:       <a href="http://pubmed.mozdev.org/">pubmedbar</a>. <b>Note:</b> Please unintall MSDbar before
   65:       installing <strong>biobar</strong>. MSDbar may be uninstalled from the dropdown menu item (Uninstall)
   66:       if <strong>jslib</strong> has been installed. You can install jslib 
   67:       <a href="http://downloads.mozdev.org/jslib/xpi/jslib_current.xpi"><strong>here</strong></a>
   68:     </p>
   69:     
   70:     <p> This project is under development and any comments/suggestions are welcome. 
   71:       Please write to <a href="mailto:jawahar at ebi dot ac dot uk">jawahar at ebi dot ac dot uk</a></p>
   72:     
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