File:  [mozdev] / biobar / www / index.html
Revision 1.12: download - view: text, annotated - select for diffs - revision graph
Thu Jul 8 21:45:01 2004 UTC (14 years, 10 months ago) by jawahar
Branches: MAIN
CVS tags: HEAD
Cleaned up look of database list

    1: 
    2: <!-- ***************** INFO/NEWS *************** -->
    3:   <div id="infoTabs">
    4:     <div class="infoTab" id="whats-new">
    5:       <h5 class="infoHeader">What's New</h5>
    6:       <ul>
    7: 	<li>biobar- First Release July 2004</li>
    8:       </ul>
    9:     </div>
   10:     
   11:     <div class="infoTab" id="other-stuff">
   12:       <h5 class="infoHeader">Other Stuff</h5>
   13:       <ul>
   14: 	<li><a href="http://msdbar.mozdev.org">MSDbar</a></li>
   15: 	<li><a href="http://mozdev.org/">mozdev.org</a></li>
   16:       </ul>
   17:     </div>
   18:     
   19:     <!-- alternative image/table base tab works better in NS4 -->
   20:     <!--
   21:   <div class="infoTab" id="whats-new-image">
   22:   <h5 class="infoHeader"><img src="http://www.mozdev.org/sharedimages/whatsnew_top.gif" width="154" alt="What's New"></h5>
   23:   <div class="infoItems">
   24:   <div>News item goes here</div>
   25:   <div>More news item goes here</div>
   26:   <div><a href="http://mozdev.org/">mozdev.org</a></div>
   27:   </div>
   28:   </div>
   29:     -->
   30:   </div>
   31:   <!-- ***************** INFO/NEWS *************** -->
   32:   
   33:   <!-- MAIN CONTENT -->
   34:   <h3> Biobar - A toolbar for browsing biological data and databases.</h3>
   35:   <p>The <strong>biobar</strong> project is a bioinformatics power-browsing toolbar for Mozilla-based browsers 
   36:     including Firefox and Netscape 7+. This toolbar provides access to all major biological data resources. 
   37:     The primary advantage of this tool is that it allows a biologist to browse and retrieve data from Genomic, 
   38:     Proteomic, Functional, Literature, Taxonomic and Structural databases. In addition to the browsing 
   39:     features, <strong>biobar</strong>
   40:     also provides links to important bioinformatics sites and services including services at the 
   41:     <a href="http://www.ebi.ac.uk/">European Bioinformatics Institute (EBI)</a>,
   42:     <a href="http://www.ncbi.nlm.nih.gov/">National Center for Biotechnology Information (NCBI)</a> and
   43:     <a href="http://www.ddbj.nig.ac.jp/">DNA Data Bank of Japan (DDBJ)</a>. The tool also 
   44:     provides links to major data deposition sites for nucleotide, protein and 3D-structure data. Finally, the 
   45:     menu also contains links to many Sequence, Structure alignment and analysis tools.</p>
   46:   
   47:   <p> The first release of biobar provides browsing access to the following biological databases:
   48: 
   49: <table style="width: 60%; text-align: left;" border="1" cellpadding="2"
   50: cellspacing="2">
   51: <tbody>
   52: <tr>
   53: <td style="vertical-align: top;">Structure Databases<br>
   54: </td>
   55: <td style="vertical-align: top;">Macromolecular Structure
   56: Database (MSD)<br>
   57: Research Collaboratory for Structural Bioinformatics (RCSB)<br>
   58: Protein Data Bank, Japan<br>
   59: Pfam<br>
   60: CATH<br>
   61: SCOP<br>
   62: </td>
   63: </tr>
   64: <tr>
   65: <td style="vertical-align: top;">Sequence Databases<br>
   66: </td>
   67: <td style="vertical-align: top;">EMBL Nucleotide Database<br>
   68: Ensembl Genome Browser<br>
   69: UniProt Sequence Database<br>
   70: InterPro<br>
   71: Expert Protein Analysis System (ExPASy)<br>
   72: <br>
   73: </td>
   74: </tr>
   75: <tr>
   76: <td style="vertical-align: top;">Functional Databases<br>
   77: </td>
   78: <td style="vertical-align: top;">Gene Ontology (GO)<br>
   79: IntAct<br>
   80: Reactome Database<br>
   81: </td>
   82: </tr>
   83: <tr>
   84: <td style="vertical-align: top;">Other Data Collections<br>
   85: </td>
   86: <td style="vertical-align: top;">NCBI Databases including PubMed,
   87: OMIM, Genome, Protein, Nucleotide, MeSH etc<br>
   88: DNA Data Bank of Japan (DDBJ)</td>
   89: </tr>
   90: </tbody>
   91: </table>
   92: </p>  
   93:   <p><img src ="biobar.jpg" alt="biobar">
   94:       
   95:       <p> Biobar is an extension of the <a href="http://msdbar.mozdev.org/">MSDbar project</a> and complements 
   96: 	the functionality provided by <a href="http://expasybar.mozdev.org/">expasybar</a> and 
   97: 	<a href="http://pubmed.mozdev.org/">pubmedbar</a>. <b>Note:</b> Please unintall MSDbar before
   98: 	installing <strong>biobar</strong>. MSDbar may be uninstalled from the dropdown menu item (Uninstall)
   99: 	if <strong>jslib</strong> has been installed. You can install jslib 
  100: 	<a href="http://downloads.mozdev.org/jslib/xpi/jslib_current.xpi"><strong>here</strong></a>
  101:       </p>
  102:       
  103:       <p> This project is under development and any comments/suggestions are welcome. 
  104: 	Please write to <script language="JavaScript">
  105: 	  document.write('<a hr'+'ef="mai'+'lto'+':'+'%6a%61%77%61%68%61%72%40%65%62%69%2e%61%63%2e%75%6b">&#106;&#97;&#119;&#97;&#104;&#97;&#114;&#64;&#101;&#98;&#105;&#46;&#97;&#99;&#46;&#117;&#107;<\/a>');
  106: 	</script></p>
  107:       
  108:       <?php require(NOTES2); ?>
  109:       
  110:       <script language="JavaScript" type="text/javascript"
  111: 	      src="http://m1.nedstatbasic.net/basic.js">
  112:       </script>
  113:       <script language="JavaScript" type="text/javascript">
  114: 	<!--
  115: 	nedstatbasic("ACOacA1b76rJ+Ei1yJIrRbvhVRDg", 0);
  116: 	// -->
  117:       </script>
  118:       <noscript> <a target="_blank"
  119: 		    href="http://v1.nedstatbasic.net/stats?ACOacA1b76rJ+Ei1yJIrRbvhVRDg"><img
  120: 		      src="http://m1.nedstatbasic.net/n?id=ACOacA1b76rJ+Ei1yJIrRbvhVRDg"
  121: 		      border="0" nosave width="18" height="18" alt="Nedstat Basic - Free web
  122: 		      site statistics"></a> </noscript>
  123:       <!-- End Nedstat Basic code -->
  124:       

FreeBSD-CVSweb <freebsd-cvsweb@FreeBSD.org>