Annotation of biobar/www/index.html, revision 1.12

1.1       david       1: 
                      2: <!-- ***************** INFO/NEWS *************** -->
1.11      jawahar     3:   <div id="infoTabs">
                      4:     <div class="infoTab" id="whats-new">
                      5:       <h5 class="infoHeader">What's New</h5>
                      6:       <ul>
                      7:        <li>biobar- First Release July 2004</li>
                      8:       </ul>
                      9:     </div>
                     10:     
                     11:     <div class="infoTab" id="other-stuff">
                     12:       <h5 class="infoHeader">Other Stuff</h5>
                     13:       <ul>
                     14:        <li><a href="http://msdbar.mozdev.org">MSDbar</a></li>
                     15:        <li><a href="http://mozdev.org/">mozdev.org</a></li>
                     16:       </ul>
                     17:     </div>
                     18:     
                     19:     <!-- alternative image/table base tab works better in NS4 -->
                     20:     <!--
1.5       jawahar    21:   <div class="infoTab" id="whats-new-image">
                     22:   <h5 class="infoHeader"><img src="http://www.mozdev.org/sharedimages/whatsnew_top.gif" width="154" alt="What's New"></h5>
                     23:   <div class="infoItems">
                     24:   <div>News item goes here</div>
                     25:   <div>More news item goes here</div>
                     26:   <div><a href="http://mozdev.org/">mozdev.org</a></div>
1.11      jawahar    27:   </div>
                     28:   </div>
                     29:     -->
                     30:   </div>
                     31:   <!-- ***************** INFO/NEWS *************** -->
                     32:   
                     33:   <!-- MAIN CONTENT -->
                     34:   <h3> Biobar - A toolbar for browsing biological data and databases.</h3>
                     35:   <p>The <strong>biobar</strong> project is a bioinformatics power-browsing toolbar for Mozilla-based browsers 
                     36:     including Firefox and Netscape 7+. This toolbar provides access to all major biological data resources. 
                     37:     The primary advantage of this tool is that it allows a biologist to browse and retrieve data from Genomic, 
                     38:     Proteomic, Functional, Literature, Taxonomic and Structural databases. In addition to the browsing 
                     39:     features, <strong>biobar</strong>
                     40:     also provides links to important bioinformatics sites and services including services at the 
                     41:     <a href="http://www.ebi.ac.uk/">European Bioinformatics Institute (EBI)</a>,
                     42:     <a href="http://www.ncbi.nlm.nih.gov/">National Center for Biotechnology Information (NCBI)</a> and
                     43:     <a href="http://www.ddbj.nig.ac.jp/">DNA Data Bank of Japan (DDBJ)</a>. The tool also 
                     44:     provides links to major data deposition sites for nucleotide, protein and 3D-structure data. Finally, the 
                     45:     menu also contains links to many Sequence, Structure alignment and analysis tools.</p>
                     46:   
                     47:   <p> The first release of biobar provides browsing access to the following biological databases:
1.12    ! jawahar    48: 
        !            49: <table style="width: 60%; text-align: left;" border="1" cellpadding="2"
        !            50: cellspacing="2">
        !            51: <tbody>
        !            52: <tr>
        !            53: <td style="vertical-align: top;">Structure Databases<br>
        !            54: </td>
        !            55: <td style="vertical-align: top;">Macromolecular Structure
        !            56: Database (MSD)<br>
        !            57: Research Collaboratory for Structural Bioinformatics (RCSB)<br>
        !            58: Protein Data Bank, Japan<br>
        !            59: Pfam<br>
        !            60: CATH<br>
        !            61: SCOP<br>
        !            62: </td>
        !            63: </tr>
        !            64: <tr>
        !            65: <td style="vertical-align: top;">Sequence Databases<br>
        !            66: </td>
        !            67: <td style="vertical-align: top;">EMBL Nucleotide Database<br>
        !            68: Ensembl Genome Browser<br>
        !            69: UniProt Sequence Database<br>
        !            70: InterPro<br>
        !            71: Expert Protein Analysis System (ExPASy)<br>
        !            72: <br>
        !            73: </td>
        !            74: </tr>
        !            75: <tr>
        !            76: <td style="vertical-align: top;">Functional Databases<br>
        !            77: </td>
        !            78: <td style="vertical-align: top;">Gene Ontology (GO)<br>
        !            79: IntAct<br>
        !            80: Reactome Database<br>
        !            81: </td>
        !            82: </tr>
        !            83: <tr>
        !            84: <td style="vertical-align: top;">Other Data Collections<br>
        !            85: </td>
        !            86: <td style="vertical-align: top;">NCBI Databases including PubMed,
        !            87: OMIM, Genome, Protein, Nucleotide, MeSH etc<br>
        !            88: DNA Data Bank of Japan (DDBJ)</td>
        !            89: </tr>
        !            90: </tbody>
        !            91: </table>
        !            92: </p>  
1.9       jawahar    93:   <p><img src ="biobar.jpg" alt="biobar">
1.11      jawahar    94:       
                     95:       <p> Biobar is an extension of the <a href="http://msdbar.mozdev.org/">MSDbar project</a> and complements 
                     96:        the functionality provided by <a href="http://expasybar.mozdev.org/">expasybar</a> and 
                     97:        <a href="http://pubmed.mozdev.org/">pubmedbar</a>. <b>Note:</b> Please unintall MSDbar before
                     98:        installing <strong>biobar</strong>. MSDbar may be uninstalled from the dropdown menu item (Uninstall)
                     99:        if <strong>jslib</strong> has been installed. You can install jslib 
                    100:        <a href="http://downloads.mozdev.org/jslib/xpi/jslib_current.xpi"><strong>here</strong></a>
                    101:       </p>
                    102:       
                    103:       <p> This project is under development and any comments/suggestions are welcome. 
                    104:        Please write to <script language="JavaScript">
                    105:          document.write('<a hr'+'ef="mai'+'lto'+':'+'%6a%61%77%61%68%61%72%40%65%62%69%2e%61%63%2e%75%6b">&#106;&#97;&#119;&#97;&#104;&#97;&#114;&#64;&#101;&#98;&#105;&#46;&#97;&#99;&#46;&#117;&#107;<\/a>');
                    106:        </script></p>
                    107:       
                    108:       <?php require(NOTES2); ?>
                    109:       
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