Diff for /biobar/www/index.html between versions 1.12 and 1.47

version 1.12, 2004/07/08 21:45:01 version 1.47, 2006/06/29 10:10:25
Line 1 Line 1
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
 <html>
 <head>
   <meta name="generator" content="HTML Tidy, see www.w3.org">
 <!-- ***************** INFO/NEWS *************** -->  <!-- ***************** INFO/NEWS *************** -->
  <div id="infoTabs">  <title></title>
    <div class="infoTab" id="whats-new"></head>
      <h5 class="infoHeader">What's New</h5><body>
      <ul><div id="infoTabs">
        <li>biobar- First Release July 2004</li><div class="infoTab" id="whats-new">
      </ul><h5 class="infoHeader">What's New</h5>
    </div><ul>
      <li>biobar 1.5 - 29 Jun 2006</li>
    <div class="infoTab" id="other-stuff">  <li>biobar 1.4 - 03 Dec 2005</li>
      <h5 class="infoHeader">Other Stuff</h5>  <li>biobar 1.3 - 09 Mar 2005</li>
      <ul>  <li>biobar- First Release July 2004</li>
        <li><a href="http://msdbar.mozdev.org">MSDbar</a></li></ul>
        <li><a href="http://mozdev.org/">mozdev.org</a></li></div>
      </ul><div class="infoTab" id="other-stuff">
    </div><h5 class="infoHeader">Other Stuff</h5>
    <ul>
    <!-- alternative image/table base tab works better in NS4 -->  <li><a href="http://mozdev.org/">mozdev.org</a></li>
    <!--  <li><a href="http://www.ebi.ac.uk/">EBI Home</a></li>
 </ul>
 </div>
 <!-- alternative image/table base tab works better in NS4 --><!--
   <div class="infoTab" id="whats-new-image">    <div class="infoTab" id="whats-new-image">
   <h5 class="infoHeader"><img src="http://www.mozdev.org/sharedimages/whatsnew_top.gif" width="154" alt="What's New"></h5>    <h5 class="infoHeader"><img src="http://www.mozdev.org/sharedimages/whatsnew_top.gif" width="154" alt="What's New"></h5>
   <div class="infoItems">    <div class="infoItems">
Line 26 Line 32
   <div><a href="http://mozdev.org/">mozdev.org</a></div>    <div><a href="http://mozdev.org/">mozdev.org</a></div>
   </div>    </div>
   </div>    </div>
    -->    --></div>
  </div><!-- ***************** INFO/NEWS *************** -->
  <!-- ***************** INFO/NEWS *************** --><!-- MAIN CONTENT -->
  <h3>Biobar - A toolbar for browsing biological data and
  <!-- MAIN CONTENT -->databases.</h3>
  <h3> Biobar - A toolbar for browsing biological data and databases.</h3><p>The <strong>biobar</strong> project is a bioinformatics
  <p>The <strong>biobar</strong> project is a bioinformatics power-browsing toolbar for Mozilla-based browsers power-browsing toolbar for Mozilla-based browsers including
    including Firefox and Netscape 7+. This toolbar provides access to all major biological data resources. Firefox/Flock/Mozilla/Netscape and Seamonkey. This toolbar provides access to all
    The primary advantage of this tool is that it allows a biologist to browse and retrieve data from Genomic, major biological data resources. The primary advantage of this
    Proteomic, Functional, Literature, Taxonomic and Structural databases. In addition to the browsing tool is that it allows a biologist to browse and retrieve data
    features, <strong>biobar</strong>from Genomic, Proteomic, Functional, Literature, Taxonomic,
    also provides links to important bioinformatics sites and services including services at the Structural, Plant and Animal-specific databases. In addition to
    <a href="http://www.ebi.ac.uk/">European Bioinformatics Institute (EBI)</a>,the browsing features, <strong>biobar</strong> also provides
    <a href="http://www.ncbi.nlm.nih.gov/">National Center for Biotechnology Information (NCBI)</a> andlinks to important bioinformatics sites and services including
    <a href="http://www.ddbj.nig.ac.jp/">DNA Data Bank of Japan (DDBJ)</a>. The tool also services at the <a href="http://www.ebi.ac.uk/">European
    provides links to major data deposition sites for nucleotide, protein and 3D-structure data. Finally, the Bioinformatics Institute (EBI)</a>, <a
    menu also contains links to many Sequence, Structure alignment and analysis tools.</p> href="http://www.ncbi.nlm.nih.gov/">National Center for Biotechnology
  Information (NCBI)</a> and <a href="http://www.ddbj.nig.ac.jp/">DNA
  <p> The first release of biobar provides browsing access to the following biological databases:Data Bank of Japan (DDBJ)</a>.
 The tool also provides links to major data deposition sites for
 nucleotide, protein and 3D-structure data. Finally, the menu also
 contains links to many Sequence, Structure alignment and analysis
 tools.</p>
 <<<<<<< index.html
 <p>The latest release <strong>(Version 1.5)</strong> of biobar
 provides browsing access to <span style="font-weight: bold;">over 46
 different databases (including Google Scholar, HubMed etc)</span> (<a href="http://biobar.mozdev.org/Databases.html">listed here</a>).</p>
   
<table style="width: 60%; text-align: left;" border="1" cellpadding="2"<p>If you have downloaded,used and liked <strong>biobar</strong>,
cellspacing="2">please spread the word by adding this icon to your webpage using the
<tbody>code below.</p>
<tr><code>&lt;a href="http://biobar.mozdev.org"&gt;&lt;img border="0"
<td style="vertical-align: top;">Structure Databases<br>src="http://biobar.mozdev.org/biobar_icon.jpg" /&gt;</code>
</td><p><img src="http://biobar.mozdev.org/biobar1.jpg" alt="biobar"></p>
<td style="vertical-align: top;">Macromolecular Structure
Database (MSD)<br><p>New in <strong>Version 1.5 (all)</strong></p>
Research Collaboratory for Structural Bioinformatics (RCSB)<br><li>Correction to broken searches in Ensembl</li>
Protein Data Bank, Japan<br><li>Correction to broken searches in RCSB PDB</li>
Pfam<br><li>Right click menu on text highlight to search literature resources</li>
CATH<br>
SCOP<br><p> New in <strong>Version 1.4 (Firefox Only)</strong></p>
</td><li>Added <a href="http://www.scirus.com/">SCIRUS</a></li>
</tr><li>Added <a href="http://www.gbif.net/">Global Biodiversity Information Facility</a></li>
<tr><li>Fixed broken links, corrected BioCyc database update problem</li>
<td style="vertical-align: top;">Sequence Databases<br>
</td><p> New in <strong>Version 1.3</strong>:
<td style="vertical-align: top;">EMBL Nucleotide Database<br></p>
Ensembl Genome Browser<br><li>Search Groups of Data (sequences, function, taxonomy)</li>
UniProt Sequence Database<br><li>Add/Save/Edit Custom Links on toolbar menu</li>
InterPro<br><li>Open searches in new tab/existing tab</li>
Expert Protein Analysis System (ExPASy)<br><li>BioCyc species read in from remote XML file for dynamic updates</li>
<br><li>Biobar code rewritten from scratch to move to a manageable XML
</td>based format.</li>
</tr><li>Add/Replace own search databases by simple edits of XML files.
<tr>See <a href="http://biobar.mozdev.org/customize.html">Customize</a></li>
<td style="vertical-align: top;">Functional Databases<br><!-- alternative image/table base tab works better in NS4 --><!--
</td>  <div class="infoTab" id="whats-new-image">
<td style="vertical-align: top;">Gene Ontology (GO)<br>  <h5 class="infoHeader"><img src="http://www.mozdev.org/sharedimages/whatsnew_top.gif" width="154" alt="What's New"></h5>
IntAct<br>  <div class="infoItems">
Reactome Database<br>  <div>News item goes here</div>
</td>  <div>More news item goes here</div>
</tr>  <div><a href="http://mozdev.org/">mozdev.org</a></div>
<tr>  </div>
<td style="vertical-align: top;">Other Data Collections<br>  </div>
</td>    --></div>
<td style="vertical-align: top;">NCBI Databases including PubMed,<!-- ***************** INFO/NEWS *************** -->
OMIM, Genome, Protein, Nucleotide, MeSH etc<br><!-- MAIN CONTENT -->
DNA Data Bank of Japan (DDBJ)</td><p><br>
</tr>This project is under development and any comments/suggestions
</tbody>are welcome. Please write to
</table><script type="text/javascript">
</p>      document.write('<a hr'+'ef="mai'+'lto'+':'+'%6a%61%77%61%68%61%72%40%65%62%69%2e%61%63%2e%75%6b">&#106;&#97;&#119;&#97;&#104;&#97;&#114;&#64;&#101;&#98;&#105;&#46;&#97;&#99;&#46;&#117;&#107;<\/a>');
  <p><img src ="biobar.jpg" alt="biobar"> 
       
      <p> Biobar is an extension of the <a href="http://msdbar.mozdev.org/">MSDbar project</a> and complements  
        the functionality provided by <a href="http://expasybar.mozdev.org/">expasybar</a> and  
        <a href="http://pubmed.mozdev.org/">pubmedbar</a>. <b>Note:</b> Please unintall MSDbar before 
        installing <strong>biobar</strong>. MSDbar may be uninstalled from the dropdown menu item (Uninstall) 
        if <strong>jslib</strong> has been installed. You can install jslib  
        <a href="http://downloads.mozdev.org/jslib/xpi/jslib_current.xpi"><strong>here</strong></a> 
      </p> 
       
      <p> This project is under development and any comments/suggestions are welcome.  
        Please write to <script language="JavaScript"> 
          document.write('<a hr'+'ef="mai'+'lto'+':'+'%6a%61%77%61%68%61%72%40%65%62%69%2e%61%63%2e%75%6b">&#106;&#97;&#119;&#97;&#104;&#97;&#114;&#64;&#101;&#98;&#105;&#46;&#97;&#99;&#46;&#117;&#107;<\/a>'); 
        </script></p> 
       
      <?php require(NOTES2); ?> 
               
       <script language="JavaScript" type="text/javascript"  
               src="http://m1.nedstatbasic.net/basic.js">  
       </script>  
       <script language="JavaScript" type="text/javascript">  
         <!--  
         nedstatbasic("ACOacA1b76rJ+Ei1yJIrRbvhVRDg", 0);  
         // -->  
       </script>  
       <noscript> <a target="_blank"  
                     href="http://v1.nedstatbasic.net/stats?ACOacA1b76rJ+Ei1yJIrRbvhVRDg"><img  
                       src="http://m1.nedstatbasic.net/n?id=ACOacA1b76rJ+Ei1yJIrRbvhVRDg"  
                       border="0" nosave width="18" height="18" alt="Nedstat Basic - Free web  
                       site statistics"></a> </noscript>  
       <!-- End Nedstat Basic code -->  
         
   
   </script></p>
   <!---      <?php require(NOTES2); ?> -->
   <script type="text/javascript" src="http://m1.nedstatbasic.net/basic.js">
       
   </script>
   <script type="text/javascript">
         <!--
         nedstatbasic("ACOacA1b76rJ+Ei1yJIrRbvhVRDg", 0);
         // -->
       
   </script>
   <noscript><a target="_blank" href=
   "http://v1.nedstatbasic.net/stats?ACOacA1b76rJ+Ei1yJIrRbvhVRDg"><img
   src=
   "http://m1.nedstatbasic.net/n?id=ACOacA1b76rJ+Ei1yJIrRbvhVRDg"
   border="0" width="18" height="18" alt=
   "Nedstat Basic - Free web site statistics"></a></noscript>
   <!-- End Nedstat Basic code -->
   </body>
   </html>

Removed from v.1.12  
changed lines
  Added in v.1.47


FreeBSD-CVSweb <freebsd-cvsweb@FreeBSD.org>