Diff for /biobar/www/index.html between versions 1.8 and 1.38

version 1.8, 2004/07/07 13:21:48 version 1.38, 2005/03/09 16:43:42
Line 1 Line 1
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
 <html>
 <head>
   <meta name="generator" content="HTML Tidy, see www.w3.org">
 <!-- ***************** INFO/NEWS *************** -->  <!-- ***************** INFO/NEWS *************** -->
     <title></title>
   </head>
   <body>
 <div id="infoTabs">  <div id="infoTabs">
  <div class="infoTab" id="whats-new"><div class="infoTab" id="whats-new">
    <h5 class="infoHeader">What's New</h5><h5 class="infoHeader">What's New</h5>
    <ul><ul>
      <li>biobar- First Release July 2004</li>  <li>biobar 1.3 - 09 Mar 2005</li>
    </ul>  <li>biobar- First Release July 2004</li>
  </div></ul>
  </div>
  <div class="infoTab" id="other-stuff"><div class="infoTab" id="other-stuff">
    <h5 class="infoHeader">Other Stuff</h5><h5 class="infoHeader">Other Stuff</h5>
    <ul><ul>
      <li><a href="http://msdbar.mozdev.org">MSDbar</a></li>  <li><a href="http://mozdev.org/">mozdev.org</a></li>
      <li><a href="http://mozdev.org/">mozdev.org</a></li>  <li><a href="http://www.ebi.ac.uk/">EBI Home</a></li>
    </ul></ul>
  </div></div>
  <!-- alternative image/table base tab works better in NS4 --><!--
  <!-- alternative image/table base tab works better in NS4 --> 
  <!-- 
   <div class="infoTab" id="whats-new-image">    <div class="infoTab" id="whats-new-image">
   <h5 class="infoHeader"><img src="http://www.mozdev.org/sharedimages/whatsnew_top.gif" width="154" alt="What's New"></h5>    <h5 class="infoHeader"><img src="http://www.mozdev.org/sharedimages/whatsnew_top.gif" width="154" alt="What's New"></h5>
   <div class="infoItems">    <div class="infoItems">
   <div>News item goes here</div>    <div>News item goes here</div>
   <div>More news item goes here</div>    <div>More news item goes here</div>
   <div><a href="http://mozdev.org/">mozdev.org</a></div>    <div><a href="http://mozdev.org/">mozdev.org</a></div>
     </div>
     </div>
       --></div>
   <!-- ***************** INFO/NEWS *************** -->
   <!-- MAIN CONTENT -->
   <h3>Biobar - A toolbar for browsing biological data and
   databases.</h3>
   <p>The <strong>biobar</strong> project is a bioinformatics
   power-browsing toolbar for Mozilla-based browsers including
   Firefox and Netscape 7+. This toolbar provides access to all
   major biological data resources. The primary advantage of this
   tool is that it allows a biologist to browse and retrieve data
   from Genomic, Proteomic, Functional, Literature, Taxonomic,
   Structural, Plant and Animal-specific databases. In addition to
   the browsing features, <strong>biobar</strong> also provides
   links to important bioinformatics sites and services including
   services at the <a href="http://www.ebi.ac.uk/">European
   Bioinformatics Institute (EBI)</a>, <a
    href="http://www.ncbi.nlm.nih.gov/">National Center for Biotechnology
   Information (NCBI)</a> and <a href="http://www.ddbj.nig.ac.jp/">DNA
   Data Bank of Japan (DDBJ)</a>.
   The tool also provides links to major data deposition sites for
   nucleotide, protein and 3D-structure data. Finally, the menu also
   contains links to many Sequence, Structure alignment and analysis
   tools.</p>
   <p>The latest release <strong>(Version 1.3)</strong> of biobar
   provides browsing access to <span style="font-weight: bold;">38
   different biological databases</span> (<a
    href="http://biobar.mozdev.org/Databases.html">listed here</a>) as well as a <b><i>significant</i></b> improvement in the codebase and functionality (See Below).</p>
   <p><img alt="biobar_icon" src="http://biobar.mozdev.org/biobar_icon.jpg">
   If you have downloaded,used and liked <strong>biobar</strong>,
   please spread the word by adding this icon to your webpage using the
   code below.</p>
   <code>&lt;a href="http://biobar.mozdev.org"&gt;&lt;img border="0"
   src="http://biobar.mozdev.org/biobar_icon.jpg" /&gt;</code>
   <p><img src="http://biobar.mozdev.org/biobar1.jpg" alt="biobar"></p>
   <p> New in <strong>Version 1.3</strong>:
   </p>
   <li>Search Groups of Data (sequences, function, taxonomy)</li>
   <li>Add/Save/Edit Custom Links on toolbar menu</li>
   <li>Open searches in new tab/existing tab</li>
   <li>BioCyc species read in from remote XML file for dynamic updates</li>
   <li>Biobar code rewritten from scratch to move to a manageable XML
   based format.</li>
   <li>Add/Replace own search databases by simple edits of XML files.
   See <a href="http://biobar.mozdev.org/customize.html">Customize</a></li>
   </body>
   <body>
   <div id="infoTabs">
   <div class="infoTab" id="whats-new">
   <h5 class="infoHeader">What's New</h5>
   <ul>
     <li>biobar 1.3 - 09 Mar 2005</li>
     <li>biobar- First Release July 2004</li>
   </ul>
   </div>
   <div class="infoTab" id="other-stuff">
   <h5 class="infoHeader">Other Stuff</h5>
   <ul>
     <li><a href="http://mozdev.org/">mozdev.org</a></li>
     <li><a href="http://www.ebi.ac.uk/">EBI Home</a></li>
   </ul>
 </div>  </div>
   <!-- alternative image/table base tab works better in NS4 --><!--
     <div class="infoTab" id="whats-new-image">
     <h5 class="infoHeader"><img src="http://www.mozdev.org/sharedimages/whatsnew_top.gif" width="154" alt="What's New"></h5>
     <div class="infoItems">
     <div>News item goes here</div>
     <div>More news item goes here</div>
     <div><a href="http://mozdev.org/">mozdev.org</a></div>
     </div>
     </div>
       --></div>
   <!-- ***************** INFO/NEWS *************** -->
   <!-- MAIN CONTENT -->
   <h3>Biobar - A toolbar for browsing biological data and
   databases.</h3>
   <p>The <strong>biobar</strong> project is a bioinformatics
   power-browsing toolbar for Mozilla-based browsers including
   Firefox and Netscape 7+. This toolbar provides access to all
   major biological data resources. The primary advantage of this
   tool is that it allows a biologist to browse and retrieve data
   from Genomic, Proteomic, Functional, Literature, Taxonomic,
   Structural, Plant and Animal-specific databases. In addition to
   the browsing features, <strong>biobar</strong> also provides
   links to important bioinformatics sites and services including
   services at the <a href="http://www.ebi.ac.uk/">European
   Bioinformatics Institute (EBI)</a>, <a
    href="http://www.ncbi.nlm.nih.gov/">National Center for Biotechnology
   Information (NCBI)</a> and <a href="http://www.ddbj.nig.ac.jp/">DNA
   Data Bank of Japan (DDBJ)</a>.
   The tool also provides links to major data deposition sites for
   nucleotide, protein and 3D-structure data. Finally, the menu also
   contains links to many Sequence, Structure alignment and analysis
   tools.</p>
   <p>The latest release <strong>(Version 1.3)</strong> of biobar
   provides browsing access to <span style="font-weight: bold;">38
   different biological databases</span> (<a
    href="http://biobar.mozdev.org/Databases.html">listed here</a>) as
   well as a <span style="font-weight: bold; font-style: italic;">significant</span>
   improvement over the previous versions (See below). With this version,
   it is possible to customize one's own search databases, and terms.</p>
   <p><img alt="biobar_icon" src="http://biobar.mozdev.org/biobar_icon.jpg">
   If you have downloaded,used and liked <strong>biobar</strong>,
   please spread the word by adding this icon to your webpage using the
   code below.</p>
   <code>&lt;a href="http://biobar.mozdev.org"&gt;&lt;img border="0"
   src="http://biobar.mozdev.org/biobar_icon.jpg" /&gt;</code>
   <p><img src="http://biobar.mozdev.org/biobar1.jpg" alt="biobar"></p>
   <p> New in <strong>Version 1.3</strong>:
   </p>
   <li>Search Groups of Data (sequences, function, taxonomy)</li>
   <li>Add/Save/Edit Custom Links on toolbar menu</li>
   <li>Open searches in new tab/existing tab</li>
   <li>BioCyc species read in from remote XML file for dynamic updates</li>
   <li>Biobar code rewritten from scratch to move to a manageable XML
   based format.</li>
   <li>Add/Replace own search databases by simple edits of XML files.
   See <a href="http://biobar.mozdev.org/customize.html">Customize</a></li>
   <div id="infoTabs">
   <div class="infoTab" id="whats-new">
   <h5 class="infoHeader">What's New</h5>
   <ul>
     <li>biobar 1.3 - 09 Mar 2005</li>
     <li>biobar- First Release July 2004</li>
   </ul>
 </div>  </div>
  --><div class="infoTab" id="other-stuff">
 <h5 class="infoHeader">Other Stuff</h5>
 <ul>
   <li><a href="http://mozdev.org/">mozdev.org</a></li>
   <li><a href="http://www.ebi.ac.uk/">EBI Home</a></li>
 </ul>
 </div>  </div>
   <!-- alternative image/table base tab works better in NS4 --><!--
     <div class="infoTab" id="whats-new-image">
     <h5 class="infoHeader"><img src="http://www.mozdev.org/sharedimages/whatsnew_top.gif" width="154" alt="What's New"></h5>
     <div class="infoItems">
     <div>News item goes here</div>
     <div>More news item goes here</div>
     <div><a href="http://mozdev.org/">mozdev.org</a></div>
     </div>
     </div>
       --></div>
 <!-- ***************** INFO/NEWS *************** -->  <!-- ***************** INFO/NEWS *************** -->
   
 <!-- MAIN CONTENT -->  <!-- MAIN CONTENT -->
    <h3> Biobar - A toolbar for browsing biological data and databases.</h3><p><br>
    <p>The <strong>biobar</strong> project is a bioinformatics power-browsing toolbar for Mozilla-based browsers This project is under development and any comments/suggestions
      including Firefox and Netscape 7+. This toolbar provides access to all major biological data resources. are welcome. Please write to
      The primary advantage of this tool is that it allows a biologist to browse and retrieve data from Genomic, <script type="text/javascript">
      Proteomic, Literature, Taxonomic and Structural databases. In addition to the browsing features, <strong>biobar</strong>    document.write('<a hr'+'ef="mai'+'lto'+':'+'%6a%61%77%61%68%61%72%40%65%62%69%2e%61%63%2e%75%6b">&#106;&#97;&#119;&#97;&#104;&#97;&#114;&#64;&#101;&#98;&#105;&#46;&#97;&#99;&#46;&#117;&#107;<\/a>');
      also provides links to important bioinformatics sites and services including services at the       
      <a href="http://www.ebi.ac.uk/">European Bioinformatics Institute (EBI)</a> and </script></p>
      <a href="http://www.ncbi.nlm.nih.gov/">National Center for Biotechnology Information (NCBI)</a>. The tool also <!---      <?php require(NOTES2); ?> -->
      provides links to major data deposition sites for nucleotide, protein and 3D-structure data. Finally, the <script type="text/javascript" src="http://m1.nedstatbasic.net/basic.js">
      menu also contains links to many Sequence, Structure alignment and analysis tools.</p> 
     
    <p> The first release of biobar provides browsing access to the following biological databases: 
      <li>Macromolecular Structure Database (MSD)</li> 
      <li>Research Collaboratory for Structural Bioinformatics (RCSB)</li> 
      <li>Protein Data Bank, Japan</li> 
      <li>Pfam</li> 
      <li>CATH</li> 
      <li>SCOP</li> 
      <li>EMBL Nucleotide Database</li>  
      <li>Ensembl Genome Browser</li> 
      <li>UniProt Sequence Database</li> 
      <li>InterPro</li> 
      <li>Gene Ontology (GO)</li> 
      <li>NEWT</li> 
      <li>Expert Protein Analysis System (ExPASy)</li> 
      <li>NCBI Databases including PubMed, OMIM, Genome, Protein, Nucleotide, MeSH etc</li> 
    </p> 
           
    <p> Biobar is an extension of the <a href="http://msdbar.mozdev.org/">MSDbar project</a> and complements </script>
      the functionality provided by <a href="http://expasybar.mozdev.org/">expasybar</a> and <script type="text/javascript">
      <a href="http://pubmed.mozdev.org/">pubmedbar</a>. <b>Note:</b> Please unintall MSDbar before 
      installing <strong>biobar</strong>. MSDbar may be uninstalled from the dropdown menu item (Uninstall) 
      if <strong>jslib</strong> has been installed. You can install jslib  
      <a href="http://downloads.mozdev.org/jslib/xpi/jslib_current.xpi"><strong>here</strong></a> 
    </p> 
     
    <p> This project is under development and any comments/suggestions are welcome.  
      Please write to <a href="mailto:jawahar at ebi dot ac dot uk">jawahar at ebi dot ac dot uk</a></p> 
     
    <?php require(NOTES2); ?> 
     
    <script language="JavaScript" type="text/javascript" 
      src="http://m1.nedstatbasic.net/basic.js"> 
    </script> 
    <script language="JavaScript" type="text/javascript"> 
       <!--        <!--
       nedstatbasic("ACOacA1b76rJ+Ei1yJIrRbvhVRDg", 0);        nedstatbasic("ACOacA1b76rJ+Ei1yJIrRbvhVRDg", 0);
       // -->        // -->
    </script>    
    <noscript> <a target="_blank"</script>
        href="http://v1.nedstatbasic.net/stats?ACOacA1b76rJ+Ei1yJIrRbvhVRDg"><img<noscript><a target="_blank" href=
          src="http://m1.nedstatbasic.net/n?id=ACOacA1b76rJ+Ei1yJIrRbvhVRDg""http://v1.nedstatbasic.net/stats?ACOacA1b76rJ+Ei1yJIrRbvhVRDg"><img
          border="0" nosave width="18" height="18" alt="Nedstat Basic - Free websrc=
          site statistics"></a> </noscript>"http://m1.nedstatbasic.net/n?id=ACOacA1b76rJ+Ei1yJIrRbvhVRDg"
    <!-- End Nedstat Basic code -->border="0" width="18" height="18" alt=
 "Nedstat Basic - Free web site statistics"></a></noscript>
 <!-- End Nedstat Basic code -->
 </body>
 </html>

Removed from v.1.8  
changed lines
  Added in v.1.38


FreeBSD-CVSweb <freebsd-cvsweb@FreeBSD.org>