Diff for /biobar/www/index.html between versions 1.12 and 1.29

version 1.12, 2004/07/08 21:45:01 version 1.29, 2005/01/21 17:09:01
Line 1 Line 1
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
 <html>
 <head>
 <!-- ***************** INFO/NEWS *************** -->  <!-- ***************** INFO/NEWS *************** -->
  <div id="infoTabs"></head>
    <div class="infoTab" id="whats-new"><body>
      <h5 class="infoHeader">What's New</h5><div id="infoTabs">
      <ul><div class="infoTab" id="whats-new">
        <li>biobar- First Release July 2004</li><h5 class="infoHeader">What's New</h5>
      </ul><ul>
    </div>  <li>biobar 1.2.3 - 21 Jan 2005</li>
      <li>biobar 1.2.2 - 09 Nov 2004</li>
    <div class="infoTab" id="other-stuff">  <li>biobar 1.1 - 28th July 2004</li>
      <h5 class="infoHeader">Other Stuff</h5>  <li>biobar- First Release July 2004</li>
      <ul></ul>
        <li><a href="http://msdbar.mozdev.org">MSDbar</a></li></div>
        <li><a href="http://mozdev.org/">mozdev.org</a></li><div class="infoTab" id="other-stuff">
      </ul><h5 class="infoHeader">Other Stuff</h5>
    </div><ul>
      <li><a href="http://mozdev.org/">mozdev.org</a></li>
    <!-- alternative image/table base tab works better in NS4 -->  <li><a href="http://www.ebi.ac.uk/">EBI Home</a></li>
    <!--</ul>
 </div>
 <!-- alternative image/table base tab works better in NS4 --><!--
   <div class="infoTab" id="whats-new-image">    <div class="infoTab" id="whats-new-image">
   <h5 class="infoHeader"><img src="http://www.mozdev.org/sharedimages/whatsnew_top.gif" width="154" alt="What's New"></h5>    <h5 class="infoHeader"><img src="http://www.mozdev.org/sharedimages/whatsnew_top.gif" width="154" alt="What's New"></h5>
   <div class="infoItems">    <div class="infoItems">
Line 26 Line 30
   <div><a href="http://mozdev.org/">mozdev.org</a></div>    <div><a href="http://mozdev.org/">mozdev.org</a></div>
   </div>    </div>
   </div>    </div>
    -->    --> </div>
  </div><!-- ***************** INFO/NEWS *************** --><!-- MAIN CONTENT -->
  <!-- ***************** INFO/NEWS *************** -->    <h3> Biobar - A toolbar for browsing biological data and databases.</h3>
      <p>The <strong>biobar</strong> project is a bioinformatics
  <!-- MAIN CONTENT -->      power-browsing toolbar for Mozilla-based browsers including Firefox and
  <h3> Biobar - A toolbar for browsing biological data and databases.</h3>      Netscape 7+. This toolbar provides access to all major biological data
  <p>The <strong>biobar</strong> project is a bioinformatics power-browsing toolbar for Mozilla-based browsers       resources. The primary advantage of this tool is that it allows a
    including Firefox and Netscape 7+. This toolbar provides access to all major biological data resources.       biologist to browse and retrieve data from Genomic, Proteomic,
    The primary advantage of this tool is that it allows a biologist to browse and retrieve data from Genomic,       Functional, Literature, Taxonomic, Structural, Plant and
    Proteomic, Functional, Literature, Taxonomic and Structural databases. In addition to the browsing       Animal-specific databases. In addition to the browsing features, <strong>biobar</strong>
    features, <strong>biobar</strong>      also provides links to important bioinformatics sites and services
    also provides links to important bioinformatics sites and services including services at the       including services at the <a href="http://www.ebi.ac.uk/">European
    <a href="http://www.ebi.ac.uk/">European Bioinformatics Institute (EBI)</a>,        Bioinformatics Institute (EBI)</a>, <a
    <a href="http://www.ncbi.nlm.nih.gov/">National Center for Biotechnology Information (NCBI)</a> and        href="http://www.ncbi.nlm.nih.gov/">National Center for Biotechnology
    <a href="http://www.ddbj.nig.ac.jp/">DNA Data Bank of Japan (DDBJ)</a>. The tool also         Information (NCBI)</a> and <a href="http://www.ddbj.nig.ac.jp/">DNA
    provides links to major data deposition sites for nucleotide, protein and 3D-structure data. Finally, the         Data Bank of Japan (DDBJ)</a>. The tool also provides links to major
    menu also contains links to many Sequence, Structure alignment and analysis tools.</p>      data deposition sites for nucleotide, protein and 3D-structure data.
        Finally, the menu also contains links to many Sequence, Structure
  <p> The first release of biobar provides browsing access to the following biological databases:      alignment and analysis tools.</p>
     <p><img src="biobar1.jpg" alt="biobar"> </p>
 
     <p> The latest release <strong>(Version 1.2.3)</strong>
       of biobar provides browsing access to <span style="font-weight: bold;">34
         different biological databases</span> (<a href="http://biobar.mozdev.org/Databases.html">listed here</a>). 
       The latest inclusions are <a href="http://www.amaze.ulb.ac.be/">aMAZE</a> and 
       <a href="http://www.kegg.com/">KEGG</a>. In addition, new search terms have been added to 
       <a href="http://www.biocyc.org/">BioCyc</a> 
       plus links to <a href="http://www.charite.de/bioinf/strap/"> STRAP </a> and 
       <a href="http://ibivu.cs.vu.nl/programs/trustwww/"> TRUST </a>analysis tools from 
         the main menu. An options menu 
         allows customization of the databases (setting up defaults, choosing which group/s
         of databases to see, adding NCBI Library LinkOuts etc).<br>
     </p>
   
 <table style="width: 60%; text-align: left;" border="1" cellpadding="2"  
 cellspacing="2">  
 <tbody>  
 <tr>  
 <td style="vertical-align: top;">Structure Databases<br>  
 </td>  
 <td style="vertical-align: top;">Macromolecular Structure  
 Database (MSD)<br>  
 Research Collaboratory for Structural Bioinformatics (RCSB)<br>  
 Protein Data Bank, Japan<br>  
 Pfam<br>  
 CATH<br>  
 SCOP<br>  
 </td>  
 </tr>  
 <tr>  
 <td style="vertical-align: top;">Sequence Databases<br>  
 </td>  
 <td style="vertical-align: top;">EMBL Nucleotide Database<br>  
 Ensembl Genome Browser<br>  
 UniProt Sequence Database<br>  
 InterPro<br>  
 Expert Protein Analysis System (ExPASy)<br>  
 <br>  
 </td>  
 </tr>  
 <tr>  
 <td style="vertical-align: top;">Functional Databases<br>  
 </td>  
 <td style="vertical-align: top;">Gene Ontology (GO)<br>  
 IntAct<br>  
 Reactome Database<br>  
 </td>  
 </tr>  
 <tr>  
 <td style="vertical-align: top;">Other Data Collections<br>  
 </td>  
 <td style="vertical-align: top;">NCBI Databases including PubMed,  
 OMIM, Genome, Protein, Nucleotide, MeSH etc<br>  
 DNA Data Bank of Japan (DDBJ)</td>  
 </tr>  
 </tbody>  
 </table>  
 </p>    
   <p><img src ="biobar.jpg" alt="biobar">  
         
       <p> Biobar is an extension of the <a href="http://msdbar.mozdev.org/">MSDbar project</a> and complements   
         the functionality provided by <a href="http://expasybar.mozdev.org/">expasybar</a> and   
         <a href="http://pubmed.mozdev.org/">pubmedbar</a>. <b>Note:</b> Please unintall MSDbar before  
         installing <strong>biobar</strong>. MSDbar may be uninstalled from the dropdown menu item (Uninstall)  
         if <strong>jslib</strong> has been installed. You can install jslib   
         <a href="http://downloads.mozdev.org/jslib/xpi/jslib_current.xpi"><strong>here</strong></a>  
       </p>  
         
       <p> This project is under development and any comments/suggestions are welcome.   
         Please write to <script language="JavaScript">  
           document.write('<a hr'+'ef="mai'+'lto'+':'+'%6a%61%77%61%68%61%72%40%65%62%69%2e%61%63%2e%75%6b">&#106;&#97;&#119;&#97;&#104;&#97;&#114;&#64;&#101;&#98;&#105;&#46;&#97;&#99;&#46;&#117;&#107;<\/a>');  
         </script></p>  
         
       <?php require(NOTES2); ?>  
         
       <script language="JavaScript" type="text/javascript"  
               src="http://m1.nedstatbasic.net/basic.js">  
       </script>  
       <script language="JavaScript" type="text/javascript">  
         <!--  
         nedstatbasic("ACOacA1b76rJ+Ei1yJIrRbvhVRDg", 0);  
         // -->  
       </script>  
       <noscript> <a target="_blank"  
                     href="http://v1.nedstatbasic.net/stats?ACOacA1b76rJ+Ei1yJIrRbvhVRDg"><img  
                       src="http://m1.nedstatbasic.net/n?id=ACOacA1b76rJ+Ei1yJIrRbvhVRDg"  
                       border="0" nosave width="18" height="18" alt="Nedstat Basic - Free web  
                       site statistics"></a> </noscript>  
       <!-- End Nedstat Basic code -->  
         
   
       <p>If you have downloaded and used <strong>biobar</strong>, I would
         appreciate your comment on how you found the toolbar. Please leave a
         comment at <a
           href="http://update.mozilla.org/extensions/moreinfo.php?id=169&amp;vid=308&amp;category=Search%20Tools&amp;vid=308&amp;page=opinion">Mozilla
           update</a></p>
       <p> Biobar is an extension of the <a href="http://msdbar.mozdev.org/">MSDbar
           project</a>. <b>Note:</b> Please
         unintall MSDbar before installing <strong>biobar</strong>. MSDbar may
         be uninstalled from the dropdown menu item (Uninstall) if <strong>jslib</strong>
         has been installed. You can install jslib <a
           href="http://downloads.mozdev.org/jslib/xpi/jslib_current.xpi"><strong>here</strong></a>
       </p>
       <p> This project is under development and any comments/suggestions are
         welcome. Please write to
         <script type="text/javascript">
           document.write('<a hr'+'ef="mai'+'lto'+':'+'%6a%61%77%61%68%61%72%40%65%62%69%2e%61%63%2e%75%6b">&#106;&#97;&#119;&#97;&#104;&#97;&#114;&#64;&#101;&#98;&#105;&#46;&#97;&#99;&#46;&#117;&#107;<\/a>');
         </script></p>
       <!---      <?php require(NOTES2); ?> -->
       <script type="text/javascript"
         src="http://m1.nedstatbasic.net/basic.js">
       </script>
       <script type="text/javascript">
         <!--
         nedstatbasic("ACOacA1b76rJ+Ei1yJIrRbvhVRDg", 0);
         // -->
       </script>
       <noscript> <a target="_blank"
           href="http://v1.nedstatbasic.net/stats?ACOacA1b76rJ+Ei1yJIrRbvhVRDg"><img
             src="http://m1.nedstatbasic.net/n?id=ACOacA1b76rJ+Ei1yJIrRbvhVRDg"
             border="0"  width="18" height="18" alt="Nedstat Basic - Free web
             site statistics"></a> </noscript>
       <!-- End Nedstat Basic code -->
     </body>
   </html>

Removed from v.1.12  
changed lines
  Added in v.1.29


FreeBSD-CVSweb <freebsd-cvsweb@FreeBSD.org>