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What's New
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Other Stuff
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Biobar - A toolbar for browsing biological data and +databases.

+

The biobar project is a bioinformatics +power-browsing toolbar for Mozilla-based browsers including +Firefox/Flock/Mozilla/Netscape and Seamonkey. This toolbar provides access to +major biological data resources. The primary advantage of this +tool is that it allows a biologist to browse and retrieve data +from Genomic, Proteomic, Functional, Literature, Taxonomic, +Structural, Plant and Animal-specific databases. In addition to +the browsing features, biobar also provides +links to important bioinformatics sites and services including +services at the European +Bioinformatics Institute (EBI), National Center for Biotechnology +Information (NCBI) and DNA +Data Bank of Japan (DDBJ). +The tool also provides links to major data deposition sites for +nucleotide, protein and 3D-structure data. Finally, the menu also +contains links to many Sequence, Structure alignment and analysis +tools.

+

The latest release of Biobar is (Version 1.5.3)(Firefox/Flock) (Install). +

  • Enabled searching PRIDE database.
  • +
  • Fixed broken searches to Flybase.
  • +
  • Added additional search options to Intact
  • +
  • Added additional search options to Gramene.
  • +
  • Added additional search options to Uniprot.
  • +
  • Updated search options for EBI.
  • +
  • Removed non-functional databases (GBIF, BIOME and GLOVAR).
  • +
  • Context Menu (right click on chosen text) cleaned up.
  • +
  • Tooltiptexts Removed from search database dropdown.
  • + +

    If you have downloaded,used and liked biobar, +please spread the word by adding this icon to your webpage using the +code below.

    +<a href="http://biobar.mozdev.org"><img border="0" +src="http://biobar.mozdev.org/biobar_icon.jpg" /> +

    biobar

    + + +

    New in Version 1.5.2 (Firefox/Flock Only).

    +
  • Correction to broken searches in Ensembl
  • +
  • Correction to broken searches in RCSB PDB
  • +
  • Right click menu on text highlight to search literature resources
  • + +

    New in Version 1.4 (Firefox Only)

    +
  • Added SCIRUS
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  • Added Global Biodiversity Information Facility
  • +
  • Fixed broken links, corrected BioCyc database update problem
  • + +

    New in Version 1.3: +

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  • Search Groups of Data (sequences, function, taxonomy)
  • +
  • Add/Save/Edit Custom Links on toolbar menu
  • +
  • Open searches in new tab/existing tab
  • +
  • BioCyc species read in from remote XML file for dynamic updates
  • +
  • Biobar code rewritten from scratch to move to a manageable XML +based format.
  • +
  • Add/Replace own search databases by simple edits of XML files. +See Customize
  • + - - -

    Biobar - A toolbar for browsing biological data and databases.

    -

    The biobar project is a bioinformatics power-browsing toolbar for Mozilla-based browsers - including Firefox and Netscape 7+. This toolbar provides access to all major biological data resources. - The primary advantage of this tool is that it allows a biologist to browse and retrieve data from Genomic, - Proteomic, Functional, Literature, Taxonomic and Structural databases. In addition to the browsing - features, biobar - also provides links to important bioinformatics sites and services including services at the - European Bioinformatics Institute (EBI), - National Center for Biotechnology Information (NCBI) and - DNA Data Bank of Japan (DDBJ). The tool also - provides links to major data deposition sites for nucleotide, protein and 3D-structure data. Finally, the - menu also contains links to many Sequence, Structure alignment and analysis tools.

    - -

    The first release of biobar provides browsing access to the following biological databases: -

  • Macromolecular Structure Database (MSD)
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  • Research Collaboratory for Structural Bioinformatics (RCSB)
  • -
  • Protein Data Bank, Japan
  • -
  • Pfam
  • -
  • CATH
  • -
  • SCOP
  • -
  • EMBL Nucleotide Database
  • -
  • Ensembl Genome Browser
  • -
  • UniProt Sequence Database
  • -
  • InterPro
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  • Gene Ontology (GO)
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  • IntAct
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  • NEWT
  • -
  • Expert Protein Analysis System (ExPASy)
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  • NCBI Databases including PubMed, OMIM, Genome, Protein, Nucleotide, MeSH etc
  • -
  • DNA Data Bank of Japan (DDBJ)
  • -

    - -

    biobar - -

    Biobar is an extension of the MSDbar project and complements - the functionality provided by expasybar and - pubmedbar. Note: Please unintall MSDbar before - installing biobar. MSDbar may be uninstalled from the dropdown menu item (Uninstall) - if jslib has been installed. You can install jslib - here -

    - -

    This project is under development and any comments/suggestions are welcome. - Please write to

    - - + --> + + +


    +This project is under development and any comments/suggestions +are welcome. Please write to + - - - - \ No newline at end of file +

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