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<h3>Databases currently included in biobar</h3>
<p><a href="http://biobar.mozdev.org/installation.html">biobar
1.3</a> provides browsing and searching access to the following
biological databases.<br>
</p>
<p>The latest inclusions ar<span style="text-decoration: underline;"><span
 style="text-decoration: underline;">e</span></span> <a
 href="http://www.arabidopsis.org/">araCyc</a> and <a
 href="http://www.bmrb.wisc.edu/">BMRB</a>. In addition, BioCyc now has
a dynamic update mechanism for updating species list. Many new
functions are now part of biobar, including customization of search
menus, adding fixed custom links on the main menu. In the 'Group' mode,
multiple databases can be searched simultaneously for a search term
with results opened in individual tabs. An options menu allows
customization of
the databases (setting up defaults, choosing which group/s of
databases to see, adding NCBI Library LinkOuts etc, choosing to see
searches in New Tabs, Same Tab etc etc).</p>
<br>
<table style="text-align: left; width: 988px; height: 312px;" border="3"
 cellpadding="2" cellspacing="2">
  <tbody>
    <tr>
      <td style="vertical-align: top;"><span style="font-weight: bold;">Data
Collections</span><br>
      </td>
      <td
 style="vertical-align: top; background-color: rgb(255, 204, 204);">1.
EBI Databases with SRS<br>
2. NCBI Databases<br>
3. DNA Database of Japan(DDBj)<br>
      </td>
      <td style="vertical-align: top;"><span style="font-weight: bold;">Functional
Databases</span><br>
      </td>
      <td
 style="vertical-align: top; background-color: rgb(255, 204, 204);">
      <ol>
        <li>aMAZE</li>
        <li>araCyc<br>
        </li>
        <li>BioCyc</li>
        <li>KEGG</li>
        <li>Gene Ontology (GO)</li>
        <li>IntAct</li>
	<li>PhenomicDB</li>
        <li>Reactome Database</li>
      </ol>
      </td>
    </tr>
    <tr>
      <td style="vertical-align: top;"><span style="font-weight: bold;">Sequence
Databases</span><br>
      </td>
      <td
 style="vertical-align: top; background-color: rgb(255, 204, 204);">
      <ol>
        <li>EMBL Nucleotide Database</li>
        <li>Ensembl Genome Browser</li>
        <li>UniProt Sequence Database</li>
        <li>InterPro</li>
        <li>Integr8</li>
        <li>Expert Protein Analysis System (ExPASy)</li>
        <li>Pfam</li>
        <li>Alternative Splicing Database (ASD)</li>
        <li>Glovar Genome Browser<br>
        </li>
      </ol>
      </td>
      <td style="vertical-align: top;"><span style="font-weight: bold;">Structural
Databases</span><br>
      </td>
      <td
 style="vertical-align: top; background-color: rgb(255, 204, 204);">
      <ol>
        <li>Macromolecular Structure Database (MSD)</li>
        <li>Research Collaboratory for Structural Bioinformatics
(RCSB)</li>
        <li>Protein Data Bank Japan (PDBj)</li>
        <li>BMRB</li>
        <li>OCA<br>
        </li>
        <li>PDBsum<br>
        </li>
        <li>EM-Search</li>
        <li>Nucleic Acid Database (NDB)</li>
        <li>CATH</li>
        <li>SCOP</li>
        <li>EDS<br>
        </li>
      </ol>
      </td>
    </tr>
    <tr>
      <td style="vertical-align: top;"><span style="font-weight: bold;">Animal
Databases</span><br>
      </td>
      <td
 style="vertical-align: top; background-color: rgb(255, 204, 204);">
      <ol>
        <li>Saccharomyces Genome Database (SGD)<br>
        </li>
        <li>Flybase</li>
        <li>Wormbase</li>
        <li>Rat Genome Database (RGD)<br>
        </li>
        <li>Mouse Genome Informatics (MGI)</li>
        <li>Zebrafish Information (ZFIN)</li>
      </ol>
      </td>
      <td style="vertical-align: top;"><span style="font-weight: bold;">Plant
Databases</span><br>
      </td>
      <td
 style="vertical-align: top; background-color: rgb(255, 204, 204);">
      <ol>
        <li>Gramene</li>
	<li>GrainGenes</li>
        <li>MaizeGDB<br>
	<li>Tropicos</li>
        </li>
      </ol>
      </td>
    </tr>
  </tbody>
</table>
<p><br>
</p>
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