--- biobar/www/Databases.html 2004/08/28 20:46:49 1.3 +++ biobar/www/Databases.html 2004/09/14 13:40:06 1.4 @@ -1,100 +1,116 @@ - + + + + +

Database currently included in biobar

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biobar 1.2 provides browsing and searching access to the following biological databases.

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biobar 1.2 provides browsing and searching access to the following +biological databases.
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+

-Data Collections
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  1. EBI Databases with SRS
  2. -
  3. NCBI Databases including PubMed
  4. -
  5. DNA Data Bank of Japan (DDBJ)
  6. -
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-Structural Databases -
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  1. Macromolecular Structure Database (MSD)
  2. -
  3. Research Collaboratory for Structural Bioinformatics (RCSB)
  4. -
  5. Protein Data Bank, Japan (PDBj)
  6. -
  7. Nucleic Acid Database (NDB)
  8. -
  9. Pfam
  10. -
  11. CATH
  12. -
  13. SCOP
  14. -
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-Sequence Databases -
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  1. EMBL Nucleotide Database
  2. -
  3. Ensembl Genome Browser
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  5. UniProt Sequence Database
  6. -
  7. InterPro
  8. -
  9. Integr8
  10. -
  11. Expert Protein Analysis System (ExPASy)
  12. -
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Functional Databases
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  1. Gene Ontology (GO)
  2. -
  3. IntAct
  4. -
  5. Reactome Database
  6. -
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Plant Databases
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  1. Gramene
  2. -
  3. MaizeGDB
  4. -
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Animal Databases
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  1. Saccharomyces Genome Database (SGD)
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  2. -
  3. Flybase
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  5. Wormbase
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  7. Rat Genome Database (RGD)
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  8. -
  9. Mouse Genome Informatics (MGI)
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  10. -
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+
+
+
+ Data Collections
+

+
+
+1. EBI Databases with SRS
+2. NCBI Databases
+3. DNA Database of Japan(DDBj)
+

+
+
+ Structure Databases
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+
    +
  1. Macromolecular Structure Database (MSD)
  2. +
  3. Research Collaboratory for Structural Bioinformatics (RCSB)
  4. +
  5. Protein Datab Bank Japan (PDBj)
  6. +
  7. Nucleic Acid Database (NDB)
  8. +
  9. Pfam
  10. +
  11. CATH
  12. +
  13. SCOP
    +
  14. +
+
+

+
+ Sequence Databases
+
+
    +
  1. EMBL Nucleotide Database
  2. +
  3. Ensembl Genome Browser
  4. +
  5. UniProt Sequence Database
  6. +
  7. InterPro
  8. +
  9. Integr8
  10. +
  11. Expert Protein Analysis System (ExPASy)
    +
  12. +
+

+
+
+ Functional Databases
+

+
    +
  1. Gene Ontology (GO)
  2. +
  3. IntAct
  4. +
  5. Reactome Database
  6. +
+

+
+ Animal Databases
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+
    +
  1. Saccharomyces Genome Database (SGD)
    +
  2. +
  3. Flybase
  4. +
  5. Wormbase
  6. +
  7. Rat Genome Database (RGD)
    +
  8. +
  9. Mouse Genome Informatics (MGI)
  10. +
+

+
+
+ Plant Databases
+

+
    +
  1. Gramene
  2. +
  3. MaizeGDB
    +
  4. +
+
+


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